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A process of optimizing setup and hold time violations comprising resynthesis of data and clock logics coupled to pins of the integrated circuit to optimize setup time violations, and resynthesizing data and clock logics coupled to pins of the integrated circuit to optimize hold time violations. Optimization of setup time violations is performed by resynthesis of the clock logics of each pin having a setup time violation to optimize the setup time violations, then resynthesis of the data logics of each pin having a setup time violation to optimize the setup time violations, and then resynthesis of the clock logics of each pin having a setup time violation to optimize the setup time violations. The hold time violations are then optimized by resynthesizing the data logics to optimize the hold time violations, and then resynthesizing the clock logics to optimize the hold time violations. Cost functions are calculated for each pin based on setup and hold time violations, and are selectively applied to the resynthesis steps.