Калайдзидис Яннис Леонтьевич
пользователь
кандидат физико-математических наук с 1992 года
Количество цитирований статей в журналах по данным
Web of Science: 5388,
Scopus: 5491
IstinaResearcherID (IRID): 3845778
Деятельность
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Статьи в журналах
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2022
Endosomal escape of delivered mRNA from endosomal recycling tubules visualized at the nanoscale
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Prasath Paramasivam,
Franke Christian,
Stöter Martin,
Höijer Andreas,
Bartesaghi Stefano,
Sabirsh Alan,
Lindfors Lennart,
Arteta Marianna Yanez,
Dahlén Anders,
Bak Annette,
Andersson Shalini,
Kalaidzidis Yannis,
Bickle Marc,
Zerial Marino
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в журнале Journal of Cell Biology, издательство Rockefeller University Press (United States), том 221, № 2
DOI
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2021
Anisotropic expansion of hepatocyte lumina enforced by apical bulkheads
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Belicova Lenka,
Repnik Urska,
Delpierre Julien,
Gralinska Elzbieta,
Seifert Sarah,
Valenzuela José Ignacio,
Morales-Navarrete Hernán Andrés,
Franke Christian,
Räägel Helin,
Shcherbinina Evgeniya,
Prikazchikova Tatiana,
Koteliansky Victor,
Vingron Martin,
Kalaidzidis Yannis L.,
Zatsepin Timofei,
Zerial Marino
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в журнале Journal of Cell Biology, издательство Rockefeller University Press (United States), том 220, № 10
DOI
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2021
Embryonic stem cells are devoid of macropinocytosis, a trafficking pathway for activin a in differentiated cells
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Kostopoulou Nikoleta,
Bellou Sofia,
Bagli Eleni,
Markou Maria,
Kostaras Eleftherios,
Hyvönen Marko,
Kalaidzidis Yiannis,
Papadopoulos Angelos,
Chalmantzi Varvara,
Kyrkou Athena,
Panopoulou Ekaterini,
Fotsis Theodore,
Murphy Carol
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в журнале Journal of Cell Science, издательство The Company of Biologists Ltd. (United Kingdom), том 134, № 13
DOI
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2020
A drug discovery platform to identify compounds that inhibit EGFR triple mutants
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Saraon Punit,
Snider Jamie,
Kalaidzidis Yannis,
Wybenga-Groot Leanne E.,
Weiss Konstantin,
Rai Ankit,
Radulovich Nikolina,
Drecun Luka,
Vučković Nika,
Vučetić Adriana,
Wong Victoria,
Thériault Brigitte,
Pham Nhu-An,
Park Jin H.,
Datti Alessandro,
Wang Jenny,
Pathmanathan Shivanthy,
Aboualizadeh Farzaneh,
Lyakisheva Anna,
Yao Zhong,
Wang Yuhui,
Joseph Babu,
Aman Ahmed,
Moran Michael F.,
Prakesch Michael,
Poda Gennady,
Marcellus Richard,
Uehling David,
Samaržija Miroslav,
Jakopović Marko,
Tsao Ming-Sound,
Shepherd Frances A.,
Sacher Adrian,
Leighl Natasha,
Akhmanova Anna,
Al-awar Rima,
Zerial Marino,
Stagljar Igor
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в журнале Nature Chemical Biology, издательство Nature Publishing Group (United Kingdom), том 16, № 5, с. 577-586
DOI
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2020
Bile canaliculi remodeling activates YAP via the actin cytoskeleton during liver regeneration
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Meyer Kirstin,
Morales-Navarrete Hernan,
Seifert Sarah,
Wilsch-Braeuninger Michaela,
Dahmen Uta,
Tanaka Elly M.,
Brusch Lutz,
Kalaidzidis Yannis,
Zerial Marino
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в журнале Molecular Systems Biology, издательство Nature Publishing Group (United Kingdom), том 16, № 2, с. e8985
DOI
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2020
Quantification of nematic cell polarity in three-dimensional tissues
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André Scholich,
Syga Simon,
Morales-Navarrete Hernán,
Segovia-Miranda Fabián,
Nonaka Hidenori,
Meyer Kirstin,
de Back Walter,
Brusch Lutz,
Kalaidzidis Yannis,
Zerial Marino,
Jülicher Frank,
Friedrich Benjamin M.
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в журнале PLoS Computational Biology, издательство Public Library of Science (United States), том 16, № 12
DOI
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2020
Resilience of three-dimensional sinusoidal networks in liver tissue
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Karschau Jens,
Scholich André,
Wise Jonathan,
Morales-Navarrete Hernán,
Kalaidzidis Yannis,
Zerial Marino,
Friedrich Benjamin M.
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в журнале PLoS Computational Biology, издательство Public Library of Science (United States), том 16, № 6, с. e1007965-e1007965
DOI
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2020
SNX27–retromer assembly recycles MT1-MMP to invadopodia and promotes breast cancer metastasis
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Sharma Priyanka,
Parveen Sameena,
Shah Lekha V.,
Mukherjee Madhumita,
Kalaidzidis Yannis,
Kozielski Anthony J.,
Rosato Roberto,
Chang Jenny C.,
Datta Sunando
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в журнале Journal of Cell Biology, издательство Rockefeller University Press (United States), том 219, № 1
DOI
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2019
Auto-regulation of Rab5 GEF activity in Rabex5 by allosteric structural changes, catalytic core dynamics and ubiquitin binding
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Lauer Janelle,
Segeletz Sandra,
Cezanne Alice,
Guaitoli Giambattista,
Raimondi Francesco,
Gentzel Marc,
Alva Vikram,
Habeck Michael,
Kalaidzidis Yannis,
Ueffing Marius,
Lupas Andrei N.,
Gloeckner Christian Johannes,
Zerial Marino
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в журнале eLife, том 8, с. e46302
DOI
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2019
Correlative SMLM and electron tomography reveals endosome nanoscale domains
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Franke Christian,
Repnik Urska,
Segeletz Sandra,
Brouilly Nicolas,
Kalaidzidis Yannis,
Verbavatz Jean-Marc,
Zerial Marino
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в журнале Traffic, издательство Blackwell Publishing Inc. (United Kingdom), том 20, № 8, с. 601-617
DOI
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2019
Liquid-crystal organization of liver tissue
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Morales-Navarrete Hernán,
Nonaka Hidenori,
Scholich Andre,
Segovia-Miranda Fabián,
de Back Walter,
Meyer Kirstin,
Bogorad Roman L.,
Koteliansky Victor,
Brusch Lutz,
Kalaidzidis Yannis,
Jülicher Frank,
Friedrich Benjamin M.,
Zerial Marino
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в журнале eLife, том 8, с. e44860
DOI
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2019
Three-dimensional spatially resolved geometrical and functional models of human liver tissue reveal new aspects of NAFLD progression
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Segovia-Miranda Fabián,
Morales-Navarrete Hernán,
Kücken Michael,
Moser Vincent,
Seifert Sarah,
Repnik Urska,
Rost Fabian,
Brosch Mario,
Hendricks Alexander,
Hinz Sebastian,
Röcken Christoph,
Lütjohann Dieter,
Kalaidzidis Yannis,
Schafmayer Clemens,
Brusch Lutz,
Hampe Jochen,
Zerial Marino
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в журнале Nature Medicine, издательство Nature Publishing Group (United Kingdom), том 25, № 12, с. 1885-1893
DOI
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2017
A Global Approach for Quantitative Super Resolution and Electron Microscopy on Cryo and Epoxy Sections Using Self-labeling Protein Tags
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Müller Andreas,
Neukam Martin,
Ivanova Anna,
Sönmez Anke,
Münster Carla,
Kretschmar Susanne,
Kalaidzidis Yannis,
Kurth Thomas,
Verbavatz Jean-Marc,
Solimena Michele
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в журнале Scientific reports, издательство Nature Publishing Group (United Kingdom), том 7, № 1
DOI
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2017
A Predictive 3D Multi-Scale Model of Biliary Fluid Dynamics in the Liver Lobule
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Meyer Kirstin,
Ostrenko Oleksandr,
Bourantas Georgios,
Morales-Navarrete Hernan,
Porat-Shliom Natalie,
Segovia-Miranda Fabian,
Nonaka Hidenori,
Ghaemi Ali,
Verbavatz Jean-Marc,
Brusch Lutz,
Ivo Sbalzarini,
Yannis Kalaidzidis,
Roberto Weigert,
Marino Zerial
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в журнале Cell Systems, том 4, № 3, с. 277-290
DOI
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2016
An endosomal tether undergoes an entropic collapse to bring vesicles together
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Murray David H.,
Jahnel Marcus,
Lauer Janelle,
Avellaneda Mario J.,
Brouilly Nicolas,
Cezanne Alice,
Morales-Navarrete Hernán,
Perini Enrico D.,
Ferguson Charles,
Lupas Andrei N.,
Kalaidzidis Yannis,
Parton Robert G.,
Grill Stephan W.,
Zerial Marino
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в журнале Nature, издательство Nature Publishing Group (United Kingdom), том 537, с. 107-111
DOI
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2016
Forebrain-specific loss of synaptic GABAA receptors results in altered neuronal excitability and synaptic plasticity in mice
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O’Sullivan Gregory A.,
Jedlicka Peter,
Chen Hong-Xing,
Kalbouneh Heba,
Ippolito Angelo,
Deller Thomas,
Nawrotzki Ralph A.,
Kuhse Jochen,
Kalaidzidis Yannis L.,
Kirsch Joachim,
Schwarzacher Stephan W.,
Betz Heinrich
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в журнале Molecular and Cellular Neurosciences, издательство Academic Press (United States), том 72, с. 101-113
DOI
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2016
The F-actin modifier villin regulates insulin granule dynamics and exocytosis downstream of islet cell autoantigen 512
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Mziaut Hassan,
Mulligan Bernard,
Hoboth Peter,
Otto Oliver,
Ivanova Anna,
Herbig Maik,
Schumann Desiree,
Hildebrandt Tobias,
Dehghany Jaber,
Sönmez Anke,
Meyer-Hermann Michael,
Guck Jochen,
Kalaidzidis Yannis,
Solimena Michele
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в журнале Molecular Metabolism, том 5, № 8, с. 656-668
DOI
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2015
A Spatial Model of Insulin-Granule Dynamics in Pancreatic β-Cells
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Dehghany J.,
Hoboth P.,
Ivanova A.,
Mziaut H.,
Müller A.,
Kalaidzidis Y.,
Solimena M.,
Meyer-Hermann M.
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в журнале Traffic, издательство Blackwell Publishing Inc. (United Kingdom), том 16, № 8, с. 797-813
DOI
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2015
APPL endosomes are not obligatory endocytic intermediates but act as stable cargo-sorting compartments
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Kalaidzidis Inna,
Miaczynska Marta,
Brewińska-Olchowik Marta,
Hupalowska Anna,
Ferguson Charles,
Parton Robert G.,
Kalaidzidis Yannis,
Zerial Marino
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в журнале Journal of Cell Biology, издательство Rockefeller University Press (United States), том 211, № 1, с. 123-144
DOI
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2015
Aged insulin granules display reduced microtubule-dependent mobility and are disposed within actin-positive multigranular bodies
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Hoboth P.,
Müller A.,
Ivanova A.,
Mziaut H.,
Dehghany J.,
Sönmez A.,
Lachnit M.,
Meyer-Hermann M.,
Kalaidzidis Y.,
Solimena M.
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в журнале Proceedings of the National Academy of Sciences of the United States of America, издательство National Academy of Sciences (United States), том 112, № 7, с. E667-E676
DOI
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2015
Identification of siRNA delivery enhancers by a chemical library screen
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Gilleron J.,
Paramasivam P.,
Zeigerer A.,
Querbes W.,
Marsico G.,
Andree C.,
Seifert S.,
Amaya P.,
Stöter M.,
Koteliansky V.,
Waldmann H.,
Fitzgerald K.,
Kalaidzidis Ya,
Akinc A.,
Maier M.A.,
Manoharan M.,
Bickle M.,
Zerial M.
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в журнале Nucleic Acids Research, издательство Oxford University Press (United Kingdom), том 43, № 16, с. 7984-8001
DOI
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2014
Deducing the mechanism of action of compounds identified in phenotypic screens by integrating their multiparametric profiles with a reference genetic screen
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Sundaramurthy Varadharajan,
Barsacchi Rico,
Chernykh Mikhail,
Stöter Martin,
Tomschke Nadine,
Bickle Marc,
Kalaidzidis Yannis,
Zerial Marino
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в журнале Nature Protocols, издательство Nature Publishing Group (United Kingdom), том 9, № 2, с. 474-490
DOI
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2014
Objective comparison of particle tracking methods
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Chenouard Nicolas,
Smal Ihor,
De Chaumont Fabrice,
Maska Martin,
Sbalzarini Ivo F.,
Gong Yuanhao,
Cardinale Janick,
Carthel Craig,
Coraluppi Stefano,
Winter Mark,
Cohen Andrew R.,
Godinez William J.,
Rohr Karl,
Kalaidzidis Yannis,
Liang Liang,
Duncan James,
Shen Hongying,
Yingke Xu,
Magnusson Klas E.G.,
Jalden Joakim,
Blau Helen M.,
Paul-Gilloteaux Perrine,
Roudot Philippe,
Kervrann Charles,
Waharte Francois,
Tinevez Jean-Yves,
Shorte Spencer L.,
Willemse Joost,
Celler Katherine,
van Wezel Gilles P.,
Dan Han-Weiand Tsai,
Yuh-Show,
de Solorzano Carlos Ortiz,
Olivo-Marin Jean-Christophe,
Meijering Erik
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в журнале Nature Methods, издательство Nature Publishing Group (United Kingdom), том 11, № 3, с. 281-289
DOI
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2014
Revealing Molecular Mechanisms by Integrating High-Dimensional Functional Screens with Protein Interaction Data
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Simeone A.,
Marsico G.,
Collinet C.,
Galvez T.,
Kalaidzidis Ya,
Zerial M.,
Beyer A.
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в журнале PLoS Computational Biology, издательство Public Library of Science (United States), том 10, № 9, с. e1003801
DOI
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2013
Age-dependent labeling and imaging of insulin secretory granules
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Ivanova A.,
Kalaidzidis Y.,
Dirkx R.,
Sarov M.,
Gerlach M.,
Schroth-Diez B.,
Müller A.,
Liu Y.,
Andree C.,
Mulligan B.,
Münster C.,
Kurth T.,
Bickle M.,
Speier S.,
Anastassiadis K.,
Solimena M.
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в журнале Diabetes, издательство American Diabetes Association (United States), том 62, с. 3687-3696
DOI
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2013
Image-based analysis of lipid nanoparticle-mediated siRNA delivery, intracellular trafficking and endosomal escape
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Gilleron J.,
Querbes W.,
Zeigerer A.,
Borodovsky A.,
Marsico G.,
Schubert U.,
Manygoats K.,
Seifert S.,
Andree C.,
Stoter M.,
Epstein-Barash H.,
Zhang LG,
Koteliansky V.,
Fitzgerald K.,
Fava E.,
Bickle M.,
Kalaidzidis Y.,
Akinc A.,
Maier M.,
Zerial M.
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в журнале Nature Biotechnology, издательство Nature Publishing Group (United Kingdom), том 31, № 7, с. 638-646
DOI
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2013
Integration of chemical and RNAi multiparametric profiles identifies triggers of intracellular mycobacterial killing
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Sundaramurthy V.,
Barsacchi R.,
Samusik N.,
Marsico G.,
Gilleron J.,
Kalaidzidis I.,
Meyenhofer F.,
Bickle M.,
Kalaidzidis Y.,
Zerial M.
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в журнале Cell Host and Microbe, издательство Cell Press (United States), том 13, № 2, с. 129-142
DOI
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2012
A General Theoretical Framework to Infer Endosomal Network Dynamics from Quantitative Image Analysis
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Foret L.,
Dawson JE,
Villasenor R.,
Collinet C.,
Deutsch A.,
Brusch L.,
Zerial M.,
Kalaidzidis Y.,
Julicher F.
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в журнале Current Biology, издательство Cell Press (United States), том 22, № 15 , с. 1381-1390
DOI
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2012
Rab5 is necessary for the biogenesis of the endolysosomal system in vivo
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Zeigerer A.,
Gilleron J.,
Bogorad RL,
Marsico G.,
Nonaka H.,
Seifert S.,
Epstein-Barash H.,
Kuchimanchi S.,
Peng CG,
Ruda VM,
Del Conte-Zerial P.,
Hengstler JG,
Kalaidzidis Y.,
Koteliansky V.,
Zerial M.
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в журнале Nature, издательство Nature Publishing Group (United Kingdom), том 485, № 7399, с. 465-470
DOI
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2011
A segmentation method to obtain a complete geometry model of the hearing organ
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Poznyakovskiy AA,
Zahnert T.,
Kalaidzidis Y.,
Lazurashvili N.,
Schmidt R.,
Hardtke HJ,
Fischer B.,
Yarin YM
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в журнале Hearing Research, издательство Elsevier BV (Netherlands), том 282, № 1-2, с. 25-34
DOI
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2010
Systems survey of endocytosis by multiparametric image analysis
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Collinet C.,
Stoter M.,
Bradshaw CR,
Samusik N.,
Rink JC,
Kenski D.,
Habermann B.,
Buchholz F.,
Henschel R.,
Mueller MS,
Nagel WE,
Fava E.,
Kalaidzidis Y.,
Zerial M.
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в журнале Nature, издательство Nature Publishing Group (United Kingdom), том 464, № 7286, с. 243-249
DOI
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2010
beta 2-Syntrophin Is a Cdk5 Substrate That Restrains the Motility of Insulin Secretory Granules
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Schubert S.,
Knoch KP,
Ouwendijk J.,
Mohammed S.,
Bodrov Y.,
Jager M.,
Altkruger A.,
Wegbrod C.,
Adams ME,
Kim Y.,
Froehner SC,
Jensen ON,
Kalaidzidis Y.,
Solimena M.
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в журнале PLoS ONE, издательство Public Library of Science (United States), том 5, № 9, с. e12929-e12929
DOI
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2009
Biologistics and the Struggle for Efficiency: Concepts and Perspectives
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Helbing D.,
Deutsch A.,
Diez S.,
Peters K.,
Kalaidzidis Y.,
Padberg-Gehle K.,
Laemmer S.,
Johansson A.,
Breier G.,
Schulze F.,
Zerial M.
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в журнале Advances in Complex Systems, издательство World Scientific Publishing Co (Singapore), том 12, № 6, с. 533-548
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2009
Reconstitution of Rab- and SNARE-dependent membrane fusion by synthetic endosomes
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Ohya T.,
Miaczynska M.,
Coskun U.,
Lommer B.,
Runge A.,
Drechsel D.,
Kalaidzidis Y.,
Zerial M.
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в журнале Nature, издательство Nature Publishing Group (United Kingdom), том 459, № 7250, с. 1091-1097
DOI
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2009
Regulation of Epidermal Growth Factor Receptor Trafficking by Lysine Deacetylase HDAC6
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Deribe YL,
Wild P.,
Chandrashaker A.,
Curak J.,
Schmidt MHH,
Kalaidzidis Y.,
Milutinovic N.,
Kratchmarova I.,
Buerkle L.,
Fetchko MJ,
Schmidt P.,
Kittanakom S.,
Brown KR,
Jurisica I.,
Blagoev B.,
Zerial M.,
Stagljar I.,
Dikic I.
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в журнале Science signaling, издательство American Association for the Advancement of Science (United States), том 2, № 102, с. e84-e84
DOI
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2008
Nucleocytoplasmic shuttling of the Golgi phosphatidylinositol 4-kinase Pik1 is regulated by 14-3-3 proteins and coordinates Golgi function with cell growth
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Demmel L.,
Beck M.,
Klose C.,
Schlaitz A-L,
Gloor Y.,
Hsu P.P.,
Havlis J.,
Shevchenko A.,
Krause E.,
Kalaidzidis Y.,
Walch-Solimena C.
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в журнале Molecular Biology of the Cell, издательство American Society for Cell Biology (United States), том 19, № 3, с. 1046-1061
DOI
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2008
The clathrin adaptor Gga2p is a phosphatidylinositol 4-phosphate effector at the Golgi exit
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Demmel L.,
Gravert M.,
Ercan E.,
Habermann B.,
Mueller-Reichert T.,
Kukhtina V.,
Haucke V.,
Baust T.,
Sohrmann M.,
Kalaidzidis Y.,
Klose C.,
Beck M.,
Peter M.,
Walch-Solimena C.
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в журнале Molecular Biology of the Cell, издательство American Society for Cell Biology (United States), том 19, № 5, с. 1991-2002
DOI
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2008
siRNA screening reveals JNK2 as an evolutionary conserved regulator of triglyceride homeostasis
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Grimard V.,
Massier J.,
Richter D.,
Schwudke D.,
Kalaidzidis Y.,
Fava E.,
Hermetter A.,
Thiele C.
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в журнале Journal of Lipid Research, издательство Lipid Research, Inc. (United States), том 49, № 11, с. 2427-40
DOI
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2007
Kinetics of Morphogen Gradient Formation
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Kicheva A.,
Pantazis P.,
Bollenbach T.,
Kalaidzidis Y.,
Bittig T.,
Jülicher F.,
González-Gaitán M.
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в журнале Science, издательство American Association for the Advancement of Science (United States), том 315, № 5811, с. 521-525
DOI
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1997
PLUK - An environment for software development
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Kalaidzidis Y.L.,
Gavrilov A.V.,
Zaitsev P.V.,
Kalaidzidis A.L.,
Korolev E.V.
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в журнале Programming and Computer Software, издательство Pleiades Publishing, Ltd (Road Town, United Kingdom), том 23, № 4, с. 206-211
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1995
GENEBEE-NET - INTERNET-BASED SERVER FOR ANALYZING BIOPOLYMERS STRUCTURE
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BRODSKY LI,
IVANOV VV,
KALAYDZIDIS YL,
LEONTOVICH AM,
NIKOLAEV VK,
FERANCHUK SI,
DRACHEV VA
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в журнале Biochemistry (Moscow), издательство Pleiades Publishing, Ltd (Road Town, United Kingdom), том 60, № 8, с. 923-928
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Статьи в сборниках
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2007
Protein domains of GTPases on membranes: Do they rely on Turing's mechanism?
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Brusch L.,
Del Conte-Zerial P.,
Kalaidzidis Y.,
Rink J.,
Habermann B.,
Zerial M.,
Deutsch A.
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в сборнике Cellular Biophysics, Regulatory Networks, Development, Biomedicine, and Data Analysis, серия Mathematical Modeling of Biological Systems, том 1, с. 33-46
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1998
Интраоперационная ультразвуковая диагностика опухолей печени с применением компьютерного анализа некоторых акустических параметров изображения
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Гаврилов А.В.,
Готье С.В.,
Зайцев П.В.,
Калайдзидис Я.Л.,
Камалов Ю.Р.,
Платова Е.Н.,
Сандриков В.А.,
Тимошин А.Д.,
Флеров К.Е.,
Цирульникова О.М.,
Шереметьева Г.Ф.
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в сборнике Клиническая физиология, место издания Москва, с. 24-35
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Доклады на конференциях
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Тезисы докладов
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1997
Роль 3D визуализации ультразвуковых изображений при обследовании больных опухолями печени
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Гаврилов А.В.,
Камалов Ю.Р.,
Сандриков В.А.,
Готье С.В.,
Калайдзидис Я.Л.,
Цирульникова О.М.,
Зайцев П.В.
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в сборнике Международная конференция по ультразвуковой диагностике, приуроченная к пятилетию кафедры ультразвуковой диагностики Российской академии последипломного образования МЗ РФ, место издания Москва, тезисы, с. 251
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Патенты
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1999
Акустический компьютерный маммограф с трехмерной визуализацией
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Авторы:
Селянин А.И.,
Коваленко А.И.,
Гаврилов А.В.,
Зайцев П.В.,
Риттер Е.Е.,
Буслаев Р.В.,
Калайдзидис Я.Л.,
Нейман С.И.,
Риман В.В.,
Фин В.А.,
Чечина И.Н.,
Маланин В.М.,
Сандриков В.А.,
Камалов Ю.Р.
- #RU 2139679, 20 октября
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Свидетельства о регистрации прав на программное обеспечение
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Участие в редколлегии журналов
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Участие в программных комитетах конференций
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Авторство учебных курсов