Lack of reproducibility of molecular phylogenetic analysis of Cyclopoida

Mikhailov, K.V.; Ivanenko, V.N.

Статья опубликована в высокорейтинговом журнале

Информация о цитировании статьи получена из Web of Science, Scopus
Статья опубликована в журнале из списка Web of Science и/или Scopus
Дата последнего поиска статьи во внешних источниках: 9 октября 2019 г.

Авторы: Mikhailov Kirill V., Ivanenko Viatcheslav N.
Журнал: Molecular Phylogenetics and Evolution
Том: 139
Год издания: 2019
Издательство: Academic Press
Местоположение издательства: United States
Первая страница: 106574
DOI: 10.1016/j.ympev.2019.106574
Аннотация: Dear Prof Zimmer, Our letter is to inform you as the Editor that we could not reproduce the phylogenetic trees published in the following paper: Khodami, S., Mercado-Salas, N.F., Tang, D. & Martinez Arbizu, P. (2019) Molecular evidence for the retention of the Thaumatopsyllidae in the order Cyclopoida (Copepoda) and establishment of four suborders and two families within the Cyclopoida. Molecular Phylogenetics and Evolution. https://doi.org/10.1016/j.ympev.2019.05.019. See comments and results of recalculation of the dataset from Khodami et al. 2019: http://dx.doi.org/10.17632/9t98ht5jfb.1. Current address: https://data.mendeley.com/datasets/9t98ht5jfb/draft?a=aca519ad-9933-49f3-9e61-f0445e080058. This paper has the same problem we found in another paper of the authors: Khodami, S., McArthur, J.V., Blanco-Bercial, L. & Martinez Arbizu, P. (2017). Molecular Phylogeny and Revision of Copepod Orders (Crustacea: Copepoda). Scientific Reports. 7, 9164 https://www.nature.com/articles/s41598-017-06656-4. The problems of that paper are discussed by us in the manuscript: Mikhailov, K.V., Ivanenko, V.N. (2019). Low support values and lack of reproducibility of molecular phylogenetic analysis of Copepoda orders. bioRxiv: e650507. https://doi.org/10.1101/650507. In order to clarify the situation, we communicated with the authors of the paper published in Molecular Phylogenetics and Evolution. Unfortunately, the authors were unable to provide us the files from the presented analyses or reproduce their own results. Supplementary information: http://dx.doi.org/10.17632/9t98ht5jfb.1.
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Lack of reproducibility of molecular phylogenetic analysis of Cyclopoidaстатья

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